Bioinformatics
- 21
- Verbumculus Genetic Sequence Analyzer
- An interesting tool to discover and visualize over- or under-represented words in genetic sequences. Requires Java support in browser. Also available as a downloadable program.
- 22
- Advanced Genetics Wizard
- Online program that calculates the distribution of offspring genotypes from dominant, codominant and recessive gene crosses, for up to 6 genes.
- 23
- BIOBASE
- The focus of the GBF project "Molecular Bioinformatics of Gene Regulation" are regulatory genomic signals and regions that govern transcriptional control based on TRANSFAC - The Transcription Factor Database. It compiles data about gene regulatory DNA sequences and protein factors binding to and acting through them.
- 24
- Carnac
- A free software tool for analysing the hypothetical secondary structure of a family of homologous RNA.
- 25
- Center Structural Biology: Programs and Tools
- User guides and worked examples for software applications in structural and molecular biology - from Yale Univ.
- 26
- Center for Biological Sequence Analysis
- Offers more than 30 online services for DNA and protein bioinformatics analysis.
- 28
- Geneva Bioinformatics (GeneBio) S.A.
- GeneBio provides proteomics software tools and databases including SWISS-PROT, PROSITE, SWISS-2DPAGE and Melanie. We also offer a secure version of ExPASy molecular biology web server.
- 29
- INCBI Irish National Centre for BioInformatics
- Hosts Irish embnet node, Gives links to Database browsing and interrogation at SRS, European (EBI) servers, Blast server for parasite genomes (EBI), US (NCBI) servers, Protein structure prediction, PredictProtein Server in Heidelberg, Gene identification, splice sites, exons, introns and a list of gene structure prediction programs
- 31
- Ligand-Gated Ion Channel Database
- LGICdb is a curated repository of genes coding for subunits of Ligand-Gated Ion Channels.
- 32
- Malaysian Genomics Resource Centre Berhad
- MGRC provides contract genomes services, sequencing services, data and access services.
- 33
- Molecular Informatics Resource for the Analysis of Gene Expression
- Information methodologies, tools, and technologies relating to the study of gene expression and signal transduction from the Institute for Transcriptional Informatics.
- 34
- Mulan
- Performs single-coverage local multiple DNA sequence alignments of finished and draft-quality genome sequences. It also provides with an option to predict transcription factor binding sites evolutionarily conserved across multiple species.
- 35
- PANDORA
- Protein ANnotation Diagram ORiented Analysis service that extracts biological information from user supplied sequences.
- 36
- ParAlign
- Service using the ParAlign algorithm to compare genetic sequences. Apparently it is as fast as BLAST and as sensitive as Smith-Waterman.
- 37
- PubCrawler
- An online service for periodically performing predefined searches at NCBI, reporting new results by email or on the web.
- 38
- Systems Biology of Photosynthesis
- Open web platform for modeling and reverse engineering of photosynthetic dynamism.